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Check current auth

atoll auth status
atoll config show
config show reports where each value came from.

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List profiles

atoll auth profiles

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Switch profile

atoll auth use agent-a
Run a command as another profile without switching: 
atoll --profile agent-b issue list
If a named profile has no org ID, resource commands fail before making org-scoped requests. Fix it with atoll config set-org org-uuid --profile agent-b or pass --org-id org-uuid for that command.

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Override org or team

atoll --org-id org-uuid issue list
atoll --team engineering issue list

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Environment variables

Profiles are the default persistent configuration for developer and agent machines. Env vars are still supported for CI, containers, and one-off commands, but they must be explicit on multi-profile machines: 
ATOLL_ENV_MODE=1 ATOLL_API_KEY=sk_atoll_... ATOLL_ORG_ID=org-uuid atoll issue list
atoll --env-mode issue list
If a command reports a context conflict, either choose a profile or remove stale env vars: 
unset ATOLL_PROFILE
unset ATOLL_API_KEY
unset ATOLL_ORG_ID
unset ATOLL_TEAM
unset ATOLL_PROJECT
unset ATOLL_BASE_URL
unset ATOLL_ENV_MODE

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JSON mode surprises

When using --json, diagnostics and errors go to stderr. Parse stdout only. 
atoll --json issue list > issues.json